Normalization summary

The normalized ATAC-seq dataset contains accessibility profiles for 8 samples.

Signal has been normalized for the following region sets:

The plot below shows the quantile-quantile relationship of unnormalized to normalized insertion counts, overall and for each sample.

Region type	tiling promoter consensusPeaks
Sample	[ALL] kidney_14_5_REP1 kidney_14_5_REP2 kidney_15_5_REP1 kidney_15_5_REP2 liver_14_5_REP1 liver_14_5_REP2 liver_15_5_REP1 liver_15_5_REP2

Figure 1

QQ-plot of unnormalized vs normalized counts

The heatmaps below show the unnormalized and normalized insertion counts at each quantile for each sample in the dataset.

Region type

tiling promoter consensusPeaks

Figure 2

Heatmaps of unnormalized vs normalized counts for each quantile and sample